Inferring contact network characteristics from epidemic data via compact mean-field models

  • Andrés Guzmán
  • , Federico Malizia
  • , Gyeong Ho Park
  • , Boseung Choi*
  • , Diana Cole
  • , István Z. Kiss*
  • *Corresponding author for this work

Research output: Contribution to journalArticlepeer-review

Abstract (may include machine translation)

Modelling epidemics using contact networks provides a significant improvement over classical compartmental models by explicitly incorporating the network of contacts. However, while network-based models describe disease spread on a given contact structure, their potential for inferring the underlying network from epidemic data remains largely unexplored. In this work, we consider the edge-based compartmental model, a compact and analytically tractable framework, and we integrate it within dynamical survival analysis to infer key network properties along with parameters of the epidemic itself. Despite correlations between structural and epidemic parameters, our framework demonstrates robustness in accurately inferring contact network properties from synthetic epidemic simulations. Additionally, we apply the framework to real-world outbreaks - the 2001 UK foot-and-mouth disease outbreak and the COVID-19 epidemic in Seoul - to estimate both disease parameters and network characteristics. Our results show that our framework achieves good fits to real-world epidemic data and reliable short-term forecasts. These findings highlight the potential of network-based inference approaches to uncover hidden contact structures, providing insights that can inform the design of targeted interventions and public health strategies.

Original languageEnglish
Article numbercnaf018
Number of pages20
JournalJournal of Complex Networks
Volume13
Issue number4
DOIs
StatePublished - 15 Jul 2025
Externally publishedYes

Keywords

  • contact networks
  • epidemics
  • inference

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